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3 Dec 2025

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Understanding Proteins: AQA A-Level Biology Notes

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Angelina Li @axgieli

Proteins are incredibly complex molecules that your body uses for everything from building muscle to carrying oxygen in... Show more

# Proteins

Primary structure
The primary structure in the
sequence of amino acids which
is actermined by an organism's
DNA.

Amino acids

A

Building Blocks of Proteins

Proteins are essentially biological LEGO blocks made from smaller units called amino acids. There are 20 naturally occurring amino acids that can combine in almost limitless ways to create the massive diversity of proteins in living things.

Each amino acid has the same basic structure an amine group (NH₂), a carboxyl group (COOH), and a unique R-group that gives each amino acid its special properties. Think of the R-group as the personality of each amino acid - it determines how they'll behave and interact with others.

When amino acids join together, they form peptide bonds through a condensation reaction (which releases water). Two amino acids create a dipeptide, whilst three or more form a polypeptide chain. These polypeptide chains are what eventually become fully functional proteins.

Quick Tip Remember that peptide bonds can be broken down again through hydrolysis (adding water back in) - this is how your digestive system breaks down dietary proteins!

# Proteins

Primary structure
The primary structure in the
sequence of amino acids which
is actermined by an organism's
DNA.

Amino acids

A

The Four Levels of Protein Structure

Understanding protein structure is like understanding architecture - you need to look at it from the foundation up to see how it all works together.

Primary structure is simply the sequence of amino acids, determined by your DNA. It's like having the instruction manual that tells you which amino acid comes next. Secondary structure forms when hydrogen bonds develop between the slightly positive N-H groups and slightly negative C=O groups in the peptide bonds, creating alpha helices (spirals) or beta pleated sheets accordionlikefoldsaccordion-like folds.

Tertiary structure is where things get really interesting. The R-groups start forming bonds with each other - strong disulphide bridges, ionic bonds (which break if pH changes), and weaker hydrogen bonds. This creates the protein's unique 3D shape, which is absolutely crucial for its function.

Quaternary structure is when multiple polypeptide chains team up, like in haemoglobin which has four chains working together. These complex proteins often include prosthetic groups nonproteinhelpersnon-protein helpers such as the iron ions in haemoglobin that actually carry the oxygen.

Lab Note You can test for proteins using the biuret test - add biuret reagent and a purple colour means protein is present!

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Basil

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This app has made me feel so much more confident in my exam prep, not only through boosting my own self confidence through the features that allow you to connect with others and feel less alone, but also through the way the app itself is centred around making you feel better. It is easy to navigate, fun to use, and helpful to anyone struggling in absolutely any way.

David K

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Sudenaz Ocak

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Greenlight Bonnie

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very reliable app to help and grow your ideas of Maths, English and other related topics in your works. please use this app if your struggling in areas, this app is key for that. wish I'd of done a review before. and it's also free so don't worry about that.

Rohan U

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I know a lot of apps use fake accounts to boost their reviews but this app deserves it all. Originally I was getting 4 in my English exams and this time I got a grade 7. I didn’t even know about this app three days until the exam and it has helped A LOT. Please actually trust me and use it as I’m sure you too will see developments.

Xander S

iOS user

THE QUIZES AND FLASHCARDS ARE SO USEFUL AND I LOVE THE SCHOOLGPT. IT ALSO IS LITREALLY LIKE CHATGPT BUT SMARTER!! HELPED ME WITH MY MASCARA PROBLEMS TOO!! AS WELL AS MY REAL SUBJECTS ! DUHHH 😍😁😲🤑💗✨🎀😮

Elisha

iOS user

This apps acc the goat. I find revision so boring but this app makes it so easy to organize it all and then you can ask the freeeee ai to test yourself so good and you can easily upload your own stuff. highly recommend as someone taking mocks now

Paul T

iOS user

The app is very easy to use and well designed. I have found everything I was looking for so far and have been able to learn a lot from the presentations! I will definitely use the app for a class assignment! And of course it also helps a lot as an inspiration.

Stefan S

iOS user

This app is really great. There are so many study notes and help [...]. My problem subject is French, for example, and the app has so many options for help. Thanks to this app, I have improved my French. I would recommend it to anyone.

Samantha Klich

Android user

Wow, I am really amazed. I just tried the app because I've seen it advertised many times and was absolutely stunned. This app is THE HELP you want for school and above all, it offers so many things, such as workouts and fact sheets, which have been VERY helpful to me personally.

Anna

iOS user

Best app on earth! no words because it’s too good

Thomas R

iOS user

Just amazing. Let's me revise 10x better, this app is a quick 10/10. I highly recommend it to anyone. I can watch and search for notes. I can save them in the subject folder. I can revise it any time when I come back. If you haven't tried this app, you're really missing out.

Basil

Android user

This app has made me feel so much more confident in my exam prep, not only through boosting my own self confidence through the features that allow you to connect with others and feel less alone, but also through the way the app itself is centred around making you feel better. It is easy to navigate, fun to use, and helpful to anyone struggling in absolutely any way.

David K

iOS user

The app's just great! All I have to do is enter the topic in the search bar and I get the response real fast. I don't have to watch 10 YouTube videos to understand something, so I'm saving my time. Highly recommended!

Sudenaz Ocak

Android user

In school I was really bad at maths but thanks to the app, I am doing better now. I am so grateful that you made the app.

Greenlight Bonnie

Android user

very reliable app to help and grow your ideas of Maths, English and other related topics in your works. please use this app if your struggling in areas, this app is key for that. wish I'd of done a review before. and it's also free so don't worry about that.

Rohan U

Android user

I know a lot of apps use fake accounts to boost their reviews but this app deserves it all. Originally I was getting 4 in my English exams and this time I got a grade 7. I didn’t even know about this app three days until the exam and it has helped A LOT. Please actually trust me and use it as I’m sure you too will see developments.

Xander S

iOS user

THE QUIZES AND FLASHCARDS ARE SO USEFUL AND I LOVE THE SCHOOLGPT. IT ALSO IS LITREALLY LIKE CHATGPT BUT SMARTER!! HELPED ME WITH MY MASCARA PROBLEMS TOO!! AS WELL AS MY REAL SUBJECTS ! DUHHH 😍😁😲🤑💗✨🎀😮

Elisha

iOS user

This apps acc the goat. I find revision so boring but this app makes it so easy to organize it all and then you can ask the freeeee ai to test yourself so good and you can easily upload your own stuff. highly recommend as someone taking mocks now

Paul T

iOS user

 

Biology

768

3 Dec 2025

2 pages

Understanding Proteins: AQA A-Level Biology Notes

user profile picture

Angelina Li

@axgieli

Proteins are incredibly complex molecules that your body uses for everything from building muscle to carrying oxygen in your blood. Understanding how these amino acid chains fold and form different structures is key to grasping how life works at the... Show more

# Proteins

Primary structure
The primary structure in the
sequence of amino acids which
is actermined by an organism's
DNA.

Amino acids

A

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Building Blocks of Proteins

Proteins are essentially biological LEGO blocks made from smaller units called amino acids. There are 20 naturally occurring amino acids that can combine in almost limitless ways to create the massive diversity of proteins in living things.

Each amino acid has the same basic structure: an amine group (NH₂), a carboxyl group (COOH), and a unique R-group that gives each amino acid its special properties. Think of the R-group as the personality of each amino acid - it determines how they'll behave and interact with others.

When amino acids join together, they form peptide bonds through a condensation reaction (which releases water). Two amino acids create a dipeptide, whilst three or more form a polypeptide chain. These polypeptide chains are what eventually become fully functional proteins.

Quick Tip: Remember that peptide bonds can be broken down again through hydrolysis (adding water back in) - this is how your digestive system breaks down dietary proteins!

# Proteins

Primary structure
The primary structure in the
sequence of amino acids which
is actermined by an organism's
DNA.

Amino acids

A

Sign up to see the contentIt's free!

Access to all documents

Improve your grades

Join milions of students

By signing up you accept Terms of Service and Privacy Policy

The Four Levels of Protein Structure

Understanding protein structure is like understanding architecture - you need to look at it from the foundation up to see how it all works together.

Primary structure is simply the sequence of amino acids, determined by your DNA. It's like having the instruction manual that tells you which amino acid comes next. Secondary structure forms when hydrogen bonds develop between the slightly positive N-H groups and slightly negative C=O groups in the peptide bonds, creating alpha helices (spirals) or beta pleated sheets accordionlikefoldsaccordion-like folds.

Tertiary structure is where things get really interesting. The R-groups start forming bonds with each other - strong disulphide bridges, ionic bonds (which break if pH changes), and weaker hydrogen bonds. This creates the protein's unique 3D shape, which is absolutely crucial for its function.

Quaternary structure is when multiple polypeptide chains team up, like in haemoglobin which has four chains working together. These complex proteins often include prosthetic groups nonproteinhelpersnon-protein helpers such as the iron ions in haemoglobin that actually carry the oxygen.

Lab Note: You can test for proteins using the biuret test - add biuret reagent and a purple colour means protein is present!

We thought you’d never ask...

What is the Knowunity AI companion?

Our AI Companion is a student-focused AI tool that offers more than just answers. Built on millions of Knowunity resources, it provides relevant information, personalised study plans, quizzes, and content directly in the chat, adapting to your individual learning journey.

Where can I download the Knowunity app?

You can download the app from Google Play Store and Apple App Store.

Is Knowunity really free of charge?

That's right! Enjoy free access to study content, connect with fellow students, and get instant help – all at your fingertips.

Most popular content in Biology

Most popular content

Can't find what you're looking for? Explore other subjects.

Students love us — and so will you.

4.9/5

App Store

4.8/5

Google Play

The app is very easy to use and well designed. I have found everything I was looking for so far and have been able to learn a lot from the presentations! I will definitely use the app for a class assignment! And of course it also helps a lot as an inspiration.

Stefan S

iOS user

This app is really great. There are so many study notes and help [...]. My problem subject is French, for example, and the app has so many options for help. Thanks to this app, I have improved my French. I would recommend it to anyone.

Samantha Klich

Android user

Wow, I am really amazed. I just tried the app because I've seen it advertised many times and was absolutely stunned. This app is THE HELP you want for school and above all, it offers so many things, such as workouts and fact sheets, which have been VERY helpful to me personally.

Anna

iOS user

Best app on earth! no words because it’s too good

Thomas R

iOS user

Just amazing. Let's me revise 10x better, this app is a quick 10/10. I highly recommend it to anyone. I can watch and search for notes. I can save them in the subject folder. I can revise it any time when I come back. If you haven't tried this app, you're really missing out.

Basil

Android user

This app has made me feel so much more confident in my exam prep, not only through boosting my own self confidence through the features that allow you to connect with others and feel less alone, but also through the way the app itself is centred around making you feel better. It is easy to navigate, fun to use, and helpful to anyone struggling in absolutely any way.

David K

iOS user

The app's just great! All I have to do is enter the topic in the search bar and I get the response real fast. I don't have to watch 10 YouTube videos to understand something, so I'm saving my time. Highly recommended!

Sudenaz Ocak

Android user

In school I was really bad at maths but thanks to the app, I am doing better now. I am so grateful that you made the app.

Greenlight Bonnie

Android user

very reliable app to help and grow your ideas of Maths, English and other related topics in your works. please use this app if your struggling in areas, this app is key for that. wish I'd of done a review before. and it's also free so don't worry about that.

Rohan U

Android user

I know a lot of apps use fake accounts to boost their reviews but this app deserves it all. Originally I was getting 4 in my English exams and this time I got a grade 7. I didn’t even know about this app three days until the exam and it has helped A LOT. Please actually trust me and use it as I’m sure you too will see developments.

Xander S

iOS user

THE QUIZES AND FLASHCARDS ARE SO USEFUL AND I LOVE THE SCHOOLGPT. IT ALSO IS LITREALLY LIKE CHATGPT BUT SMARTER!! HELPED ME WITH MY MASCARA PROBLEMS TOO!! AS WELL AS MY REAL SUBJECTS ! DUHHH 😍😁😲🤑💗✨🎀😮

Elisha

iOS user

This apps acc the goat. I find revision so boring but this app makes it so easy to organize it all and then you can ask the freeeee ai to test yourself so good and you can easily upload your own stuff. highly recommend as someone taking mocks now

Paul T

iOS user

The app is very easy to use and well designed. I have found everything I was looking for so far and have been able to learn a lot from the presentations! I will definitely use the app for a class assignment! And of course it also helps a lot as an inspiration.

Stefan S

iOS user

This app is really great. There are so many study notes and help [...]. My problem subject is French, for example, and the app has so many options for help. Thanks to this app, I have improved my French. I would recommend it to anyone.

Samantha Klich

Android user

Wow, I am really amazed. I just tried the app because I've seen it advertised many times and was absolutely stunned. This app is THE HELP you want for school and above all, it offers so many things, such as workouts and fact sheets, which have been VERY helpful to me personally.

Anna

iOS user

Best app on earth! no words because it’s too good

Thomas R

iOS user

Just amazing. Let's me revise 10x better, this app is a quick 10/10. I highly recommend it to anyone. I can watch and search for notes. I can save them in the subject folder. I can revise it any time when I come back. If you haven't tried this app, you're really missing out.

Basil

Android user

This app has made me feel so much more confident in my exam prep, not only through boosting my own self confidence through the features that allow you to connect with others and feel less alone, but also through the way the app itself is centred around making you feel better. It is easy to navigate, fun to use, and helpful to anyone struggling in absolutely any way.

David K

iOS user

The app's just great! All I have to do is enter the topic in the search bar and I get the response real fast. I don't have to watch 10 YouTube videos to understand something, so I'm saving my time. Highly recommended!

Sudenaz Ocak

Android user

In school I was really bad at maths but thanks to the app, I am doing better now. I am so grateful that you made the app.

Greenlight Bonnie

Android user

very reliable app to help and grow your ideas of Maths, English and other related topics in your works. please use this app if your struggling in areas, this app is key for that. wish I'd of done a review before. and it's also free so don't worry about that.

Rohan U

Android user

I know a lot of apps use fake accounts to boost their reviews but this app deserves it all. Originally I was getting 4 in my English exams and this time I got a grade 7. I didn’t even know about this app three days until the exam and it has helped A LOT. Please actually trust me and use it as I’m sure you too will see developments.

Xander S

iOS user

THE QUIZES AND FLASHCARDS ARE SO USEFUL AND I LOVE THE SCHOOLGPT. IT ALSO IS LITREALLY LIKE CHATGPT BUT SMARTER!! HELPED ME WITH MY MASCARA PROBLEMS TOO!! AS WELL AS MY REAL SUBJECTS ! DUHHH 😍😁😲🤑💗✨🎀😮

Elisha

iOS user

This apps acc the goat. I find revision so boring but this app makes it so easy to organize it all and then you can ask the freeeee ai to test yourself so good and you can easily upload your own stuff. highly recommend as someone taking mocks now

Paul T

iOS user