The Four Levels of Protein Structure
Understanding protein structure is like understanding architecture - you need to look at it from the foundation up to see how it all works together.
Primary structure is simply the sequence of amino acids, determined by your DNA. It's like having the instruction manual that tells you which amino acid comes next. Secondary structure forms when hydrogen bonds develop between the slightly positive N-H groups and slightly negative C=O groups in the peptide bonds, creating alpha helices (spirals) or beta pleated sheets accordion−likefolds.
Tertiary structure is where things get really interesting. The R-groups start forming bonds with each other - strong disulphide bridges, ionic bonds (which break if pH changes), and weaker hydrogen bonds. This creates the protein's unique 3D shape, which is absolutely crucial for its function.
Quaternary structure is when multiple polypeptide chains team up, like in haemoglobin which has four chains working together. These complex proteins often include prosthetic groups non−proteinhelpers such as the iron ions in haemoglobin that actually carry the oxygen.
Lab Note: You can test for proteins using the biuret test - add biuret reagent and a purple colour means protein is present!